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Structural modeling of L-galactonolactone dehydrogenase from Trypanosoma cruzi

Aleksandr Vladimirovich Veselovsky 2
Aleksandr Vladimirovich Veselovsky
Elena Vadimovna Kudryashova 1
Elena Vadimovna Kudryashova
2 V. N. Orekhovich Institute of Biomedical Chemistry, 119121 Moscow, Russian Federation
Published 2025-02-18
CommunicationVolume 35, Issue 2, 133-135
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Shegolev V. O., Veselovsky A. V., Kudryashova E. V. Structural modeling of L-galactonolactone dehydrogenase from Trypanosoma cruzi // Mendeleev Communications. 2025. Vol. 35. No. 2. pp. 133-135.
GOST all authors (up to 50) Copy
Shegolev V. O., Veselovsky A. V., Kudryashova E. V. Structural modeling of L-galactonolactone dehydrogenase from Trypanosoma cruzi // Mendeleev Communications. 2025. Vol. 35. No. 2. pp. 133-135.
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TY - JOUR
DO - 10.71267/mencom.7590
UR - https://mendcomm.colab.ws/publications/10.71267/mencom.7590
TI - Structural modeling of L-galactonolactone dehydrogenase from Trypanosoma cruzi
T2 - Mendeleev Communications
AU - Shegolev, Vsevolod Olegovich
AU - Veselovsky, Aleksandr Vladimirovich
AU - Kudryashova, Elena Vadimovna
PY - 2025
DA - 2025/02/18
PB - Mendeleev Communications
SP - 133-135
IS - 2
VL - 35
ER -
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@article{2025_Shegolev,
author = {Vsevolod Olegovich Shegolev and Aleksandr Vladimirovich Veselovsky and Elena Vadimovna Kudryashova},
title = {Structural modeling of L-galactonolactone dehydrogenase from Trypanosoma cruzi},
journal = {Mendeleev Communications},
year = {2025},
volume = {35},
publisher = {Mendeleev Communications},
month = {Feb},
url = {https://mendcomm.colab.ws/publications/10.71267/mencom.7590},
number = {2},
pages = {133--135},
doi = {10.71267/mencom.7590}
}
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Shegolev, Vsevolod Olegovich, et al. “Structural modeling of L-galactonolactone dehydrogenase from Trypanosoma cruzi.” Mendeleev Communications, vol. 35, no. 2, Feb. 2025, pp. 133-135. https://mendcomm.colab.ws/publications/10.71267/mencom.7590.

Keywords

AlphaFold
Chagas disease
docking.
flavin adenine dinucleotide
molecular dynamics
Trypanosoma cruzi

Abstract

A structural model of the Trypanosoma cruzi l-galactonolactone dehydrogenase enzyme, a potential drug target for Chagas disease, is presented. Constructed using a hybrid approach, the model was validated via molecular dynamics, ensemble docking and experimental data (circular dichroism and IC50 values) with good agreement. The model holds promise for virtual screening of new inhibitors.

Funders

Intellect

References

.
Improved Enzymatic Assay and Inhibition Analysis of Redox Membranotropic Enzymes, AtGALDH and TcGAL, Using a Reversed Micellar System
Chudin A.A., Kudryashova E.V.
Analytica—A Journal of Analytical Chemistry and Chemical Analysis, 2022
.
Galactonolactone oxidoreductase from Trypanosoma cruzi employs a FAD cofactor for the synthesis of vitamin C
Kudryashova E.V., Leferink N.G., Slot I.G., van Berkel W.J.
Biochimica et Biophysica Acta - Proteins and Proteomics, 2011
.
Allylpolyalkoxybenzene Inhibitors of Galactonolactone Oxidase from Trypanosoma cruzi
Chudin A.A., Zlotnikov I.D., Krylov S.S., Semenov V.V., Kudryashova E.V.
Biochemistry (Moscow), 2023
.
Aldonolactone Oxidoreductases
Leferink N.G., van Berkel W.J.
Methods in Molecular Biology, 2014
.
Deep reinforcement learning for de novo drug design
Popova M., Isayev O., Tropsha A.
Science advances, 2018
.
Highly accurate protein structure prediction with AlphaFold
Jumper J., Evans R., Pritzel A., Green T., Figurnov M., Ronneberger O., Tunyasuvunakool K., Bates R., Žídek A., Potapenko A., Bridgland A., Meyer C., Kohl S.A., Ballard A.J., Cowie A., et. al.
Nature, 2021
.
AutoDock Vina 1.2.0: New Docking Methods, Expanded Force Field, and Python Bindings
Eberhardt J., Santos-Martins D., Tillack A.F., Forli S.
Journal of Chemical Information and Modeling, 2021
.
Advances in the treatment of Chagas disease: Promising new drugs, plants and targets
García-Huertas P., Cardona-Castro N.
Biomedicine and Pharmacotherapy, 2021
.
AlphaFold, allosteric, and orthosteric drug discovery: Ways forward
Nussinov R., Zhang M., Liu Y., Jang H.
Drug Discovery Today, 2023
.
Chemprop: A Machine Learning Package for Chemical Property Prediction
Heid E., Greenman K.P., Chung Y., Li S., Graff D.E., Vermeire F.H., Wu H., Green W.H., McGill C.J.
Journal of Chemical Information and Modeling, 2023
.
Structure, mechanism, and evolution of the last step in vitamin C biosynthesis
Boverio A., Jamil N., Mannucci B., Mascotti M.L., Fraaije M.W., Mattevi A.
Nature Communications, 2024