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Modeling of the glycine tripeptide cyclization in the Ser65Gly/Tyr66Gly mutant of green fluorescent protein

Bella Lyudvigovna Grigorenko 1, 2
Bella Lyudvigovna Grigorenko
, 
Ekaterina Dmitrievna Kots 1, 2
Ekaterina Dmitrievna Kots
, 
Anna I Krylov 3
Anna I Krylov
, 
Alexander Vladimirovich Nemukhin 1, 2
Alexander Vladimirovich Nemukhin
10.1016/j.mencom.2019.03.024
Published 2019-03-01
Communication , Volume 29, Issue 2, 187-189
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Grigorenko B. L. et al. Modeling of the glycine tripeptide cyclization in the Ser65Gly/Tyr66Gly mutant of green fluorescent protein // Mendeleev Communications. 2019. Vol. 29. No. 2. pp. 187-189.
GOST all authors (up to 50) Copy
Grigorenko B. L., Kots E. D., Krylov A. I., Nemukhin A. V. Modeling of the glycine tripeptide cyclization in the Ser65Gly/Tyr66Gly mutant of green fluorescent protein // Mendeleev Communications. 2019. Vol. 29. No. 2. pp. 187-189.
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TY - JOUR
DO - 10.1016/j.mencom.2019.03.024
UR - https://mendcomm.colab.ws/publications/10.1016/j.mencom.2019.03.024
TI - Modeling of the glycine tripeptide cyclization in the Ser65Gly/Tyr66Gly mutant of green fluorescent protein
T2 - Mendeleev Communications
AU - Grigorenko, Bella Lyudvigovna
AU - Kots, Ekaterina Dmitrievna
AU - Krylov, Anna I
AU - Nemukhin, Alexander Vladimirovich
PY - 2019
DA - 2019/03/01
PB - Mendeleev Communications
SP - 187-189
IS - 2
VL - 29
ER -
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@article{2019_Grigorenko,
author = {Bella Lyudvigovna Grigorenko and Ekaterina Dmitrievna Kots and Anna I Krylov and Alexander Vladimirovich Nemukhin},
title = {Modeling of the glycine tripeptide cyclization in the Ser65Gly/Tyr66Gly mutant of green fluorescent protein},
journal = {Mendeleev Communications},
year = {2019},
volume = {29},
publisher = {Mendeleev Communications},
month = {Mar},
url = {https://mendcomm.colab.ws/publications/10.1016/j.mencom.2019.03.024},
number = {2},
pages = {187--189},
doi = {10.1016/j.mencom.2019.03.024}
}
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Grigorenko, Bella Lyudvigovna, et al. “Modeling of the glycine tripeptide cyclization in the Ser65Gly/Tyr66Gly mutant of green fluorescent protein.” Mendeleev Communications, vol. 29, no. 2, Mar. 2019, pp. 187-189. https://mendcomm.colab.ws/publications/10.1016/j.mencom.2019.03.024.

Abstract

The quantum mechanics/molecular mechanics approach is used to model the chain of elementary reactions involved in the backbone cyclization of the initially non-cyclized Gly65–Gly66–Gly67 tripeptide inside the protein matrix of the green fluorescent protein (GFP) Ser65Gly/Tyr66Gly mutant. The computationally characterized reaction mechanism provides support for understanding chromophore maturation in GFP-like fluorescent proteins.

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